CDS : 2354-2650, 297 bp, : gp4 predicted 11.1 kD protein (98 Aa)
misc_feature: 2405-2569, 165 bp,HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and...; Region: HNHc; cd00085
misc_feature:2486-2569,active site
By Snapgen software:
By Artemis software:
Aa sequence (98Aa):
misc_feature HNH nucleases, Aa sequence ( 55Aa):
misc_feature ;active site,Aa sequence :DDHKPNLCRHS
misc-features: start and end:
HNH nucleases
HNH motifs:
consensus: e-x-h-H-i-x-p-x(2,4)-g-x(5,6)-N-l-x(3)-t-p-x(2,3)-H-x(3)-h ; capitalized letters are most conserved.
Scientific works:
My contribution
By mJemboss software
Statistics on the protein properties:
one signal cleavage site in the protein sequence:
Poor Pest motif:
Virtual 2G-gel:
In the sequence there are two motifs:
-DVDHK ( D/E X)K
-HSRSNLQAICRVCH
consensus:e-x-h-H-i-x-p-x(2,4)-g-x(5,6)-N-l-x(3)-t-p-x(2,3)-H-x(3)-h